$161 Flight Deals from San Jose to San Diego

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Stops

Up to 1 stop
$349
Up to 2 stops
$324

Airlines

Alaska Airlines
$324
American Airlines
$343
JetBlue
$587

Cabin Class

Economy
$324

Departure Airports

Juan Santamaria International Airport
$324

Arrival Airports

San Diego International Airport
$324

Layover Airports

Charlotte Douglas International Airport
$358
Chicago O Hare Airport
$368
Dallas Fort Worth International Airport
$343
Fort Lauderdale Hollywood International Airport
$587
General Edward Lawrence Logan International Airport
$587
George Bush Intercontinental Houston Airport
$954
Harry Reid International Airport
$324
La Aurora Airport
$754
Los Angeles International Airport
$324
Miami International Airport
$343
New York John F Kennedy Airport
$587
Norman Y. Mineta San Jose International Airport
$324
Orlando International Airport
$587
Philadelphia International Airport
$343
Phoenix Sky Harbor International Airport
$358
San Francisco International Airport
$676
Washington Dulles Airport
$591

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Exclusively for Priceline Members
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BUNDLE & SAVE

Book a flight & hotel together for extra savings.

On average save $240 per traveler

Alaska Airlines

11/11/25

1:58am

SJO

14h 22m

LAX

LAS

11/11/25

4:20pm

SAN

Alaska Airlines

11/18/25

10:25am

SAN

14h 13m

SJC

LAX

11/19/25

12:38am

SJO

^$324

American Airlines

11/11/25

3:11pm

SJO

17h 23m

MIA

DFW

11/12/25

8:34am

SAN

American Airlines

11/18/25

10:41pm

SAN

22h 14m

PHL

MIA

11/19/25

8:55pm

SJO

^$343

American Airlines

11/11/25

2:59pm

SJO

17h 35m

DFW

11/12/25

8:34am

SAN

American Airlines

11/18/25

5:00pm

SAN

20h 59m

DFW

MIA

11/19/25

1:59pm

SJO

^$343

American Airlines

11/11/25

2:59pm

SJO

17h 35m

DFW

11/12/25

8:34am

SAN

American Airlines

11/18/25

12:25pm

SAN

25h 34m

MIA

11/19/25

1:59pm

SJO

^$349

American Airlines

11/26/25

1:23pm

SJO

19h 10m

CLT

PHX

11/27/25

8:33am

SAN

American Airlines

12/01/25

10:02pm

SAN

36h 33m

CLT

MIA

12/03/25

10:35am

SJO

^$358

American Airlines

11/26/25

6:22am

SJO

13h 56m

DFW

11/26/25

8:18pm

SAN

American Airlines

12/01/25

10:02pm

SAN

36h 33m

CLT

MIA

12/03/25

10:35am

SJO

^$358

American Airlines

11/18/25

3:11pm

SJO

18h 47m

MIA

DFW

11/19/25

9:58am

SAN

American Airlines

12/09/25

10:36pm

SAN

21h 26m

ORD

12/10/25

8:02pm

SJO

^$368

American Airlines

11/18/25

1:23pm

SJO

21h 55m

CLT

11/19/25

11:18am

SAN

American Airlines

12/09/25

6:16am

SAN

13h 46m

ORD

12/09/25

8:02pm

SJO

^$373

American Airlines

11/24/25

1:23pm

SJO

19h 11m

CLT

DFW

11/25/25

8:34am

SAN

American Airlines

11/28/25

10:39pm

SAN

23h 22m

ORD

11/29/25

10:01pm

SJO

^$377

American Airlines

11/24/25

1:23pm

SJO

29h 17m

CLT

11/25/25

6:40pm

SAN

American Airlines

11/28/25

10:39pm

SAN

23h 22m

ORD

11/29/25

10:01pm

SJO

^$382

American Airlines

11/18/25

3:11pm

SJO

18h 47m

MIA

DFW

11/19/25

9:58am

SAN

American Airlines

12/09/25

7:58pm

SAN

14h 37m

PHX

MIA

12/10/25

10:35am

SJO

^$439

Alaska Airlines

11/18/25

1:58am

SJO

17h 10m

LAX

LAS

11/18/25

7:08pm

SAN

Alaska Airlines

12/09/25

8:20am

SAN

14h 40m

LAS

LAX

12/09/25

11:00pm

SJO

^$448

JetBlue

11/18/25

1:39pm

SJO

24h 3m

MCO

BOS

11/19/25

1:42pm

SAN

JetBlue

12/09/25

9:05pm

SAN

15h 51m

JFK

FLL

12/10/25

12:56pm

SJO

^$587

JetBlue

11/11/25

1:39pm

SJO

23h 9m

MCO

JFK

11/12/25

12:48pm

SAN

JetBlue

11/18/25

9:05pm

SAN

37h 46m

JFK

MCO

11/20/25

10:51am

SJO

^$588

Alaska Airlines

11/18/25

1:58am

SJO

12h 9m

LAX

SJC

11/18/25

2:07pm

SAN

Alaska Airlines

12/09/25

9:15am

SAN

18h 20m

IAD

12/10/25

3:35am

SJO

^$591

JetBlue

11/18/25

4:25pm

SJO

20h 23m

JFK

11/19/25

12:48pm

SAN

JetBlue

12/09/25

9:05pm

SAN

15h 51m

JFK

FLL

12/10/25

12:56pm

SJO

^$627

JetBlue

11/11/25

1:39pm

SJO

23h 9m

MCO

JFK

11/12/25

12:48pm

SAN

JetBlue

11/18/25

9:05pm

SAN

17h 47m

JFK

11/19/25

2:52pm

SJO

^$632

American Airlines

11/24/25

1:23pm

SJO

19h 11m

CLT

DFW

11/25/25

8:34am

SAN

American Airlines

11/28/25

5:02pm

SAN

19h 20m

PHX

CLT

11/29/25

12:22pm

SJO

^$654

Alaska Airlines

12/03/25

2:26am

SJO

11h 40m

LAX

SFO

12/03/25

2:06pm

SAN

Alaska Airlines

12/10/25

8:20am

SAN

14h 40m

LAS

LAX

12/10/25

11:00pm

SJO

^$676

JetBlue

12/03/25

1:40pm

SJO

29h 41m

MCO

BOS

12/04/25

7:21pm

SAN

JetBlue

12/10/25

3:22pm

SAN

23h 34m

JFK

12/11/25

2:56pm

SJO

^$729

Alaska Airlines

11/11/25

1:58am

SJO

8h 23m

LAX

11/11/25

10:21am

SAN

Alaska Airlines

11/18/25

10:25am

SAN

14h 13m

SJC

LAX

11/19/25

12:38am

SJO

^$735

Alaska Airlines

11/11/25

1:58am

SJO

12h 9m

LAX

SJC

11/11/25

2:07pm

SAN

Alaska Airlines

11/18/25

11:02am

SAN

20h 43m

LAX

GUA

11/19/25

7:45am

SJO

^$754

JetBlue

12/03/25

1:40pm

SJO

29h 41m

MCO

BOS

12/04/25

7:21pm

SAN

JetBlue

12/10/25

11:50am

SAN

27h 6m

BOS

JFK

12/11/25

2:56pm

SJO

^$850

Alaska Airlines

11/26/25

1:30am

SJO

14h 50m

LAX

LAS

11/26/25

4:20pm

SAN

Alaska Airlines

12/01/25

6:15am

SAN

17h 26m

SFO

LAX

12/01/25

11:41pm

SJO

^$852

Alaska Airlines

11/18/25

1:58am

SJO

12h 9m

LAX

SJC

11/18/25

2:07pm

SAN

Alaska Airlines

12/09/25

6:15am

SAN

14h 24m

LAX

IAH

12/09/25

8:39pm

SJO

^$954

JetBlue

11/26/25

2:00pm

SJO

19h 5m

FLL

JFK

11/27/25

9:05am

SAN

JetBlue

12/01/25

9:15pm

SAN

17h 41m

JFK

12/02/25

2:56pm

SJO

^$1059

JetBlue

11/26/25

2:00pm

SJO

19h 5m

FLL

JFK

11/27/25

9:05am

SAN

JetBlue

12/01/25

8:34pm

SAN

16h 37m

BOS

FLL

12/02/25

1:11pm

SJO

^$1059

Alaska Airlines

11/27/25

1:30am

SJO

31h 9m

LAX

SFO

11/28/25

8:39am

SAN

Alaska Airlines

11/30/25

6:15am

SAN

17h 26m

SFO

LAX

11/30/25

11:41pm

SJO

^$1060

Alaska Airlines

12/03/25

2:26am

SJO

13h 40m

LAX

SFO

12/03/25

4:06pm

SAN

Alaska Airlines

12/10/25

6:15am

SAN

14h 24m

LAX

IAH

12/10/25

8:39pm

SJO

^$1072

Alaska Airlines

11/27/25

1:30am

SJO

31h 9m

LAX

SFO

11/28/25

8:39am

SAN

Alaska Airlines

11/30/25

10:20am

SAN

10h 19m

IAH

11/30/25

8:39pm

SJO

^$1099

Top Deals on flights from San Jose to San Diego

San Jose, CR (SJO) - San Diego, US (SAN)

Aug 27

11:27am

SJO

19h 54m

MCO

LAS

Aug 28

7:21am

SAN

as low as

^$161

San Jose, CR (SJO) - San Diego, US (SAN)

Aug 28

5:54pm

SJO

23h 50m

PTY

Aug 29

5:44pm

SAN

as low as

^$180

San Jose, CR (SJO) - San Diego, US (SAN)

American Airlines

Sep 20

1:45pm

SJO

19h 42m

CLT

Sep 21

9:27am

SAN

as low as

^$193

San Jose, CR (SJO) - San Diego, US (SAN)

American Airlines

Jan 28

6:25am

SJO

15h 58m

MIA

Jan 28

10:23pm

SAN

as low as

^$193

San Jose, CR (SJO) - San Diego, US (SAN)

American Airlines

Nov 26

6:22am

SJO

8h 15m

DFW

Nov 26

2:37pm

SAN

as low as

^$197

San Jose, CR (SJO) - San Diego, US (SAN)

Alaska Airlines

Jan 29

2:26am

SJO

13h 57m

LAX

SJC

Jan 29

4:23pm

SAN

as low as

^$198

San Jose, CR (SJO) - San Diego, US (SAN)

American Airlines

Aug 28

1:00pm

SJO

20h 44m

MIA

ORD

Aug 29

9:44am

SAN

as low as

^$203

San Jose, CR (SJO) - San Diego, US (SAN)

Nov 16

8:45am

SJO

11h 20m

IAH

Nov 16

8:05pm

SAN

as low as

^$223

San Jose, CR (SJO) - San Diego, US (SAN)

Oct 18

8:37am

SJO

12h 12m

SFO

Oct 18

8:49pm

SAN

as low as

^$223

San Jose, CR (SJO) - San Diego, US (SAN)

JetBlue

Sep 15

1:00pm

SJO

30h 30m

FLL

JFK

Sep 16

7:30pm

SAN

as low as

^$266

San Jose, CR (SJO) - San Diego, US (SAN)

JetBlue

Jan 28

2:00pm

SJO

23h 57m

FLL

BOS

Jan 29

1:57pm

SAN

as low as

^$285

San Jose, CR (SJO) - San Diego, US (SAN)

American Airlines

Sep 20

6:00am

SJO

15h 43m

MIA

PHL

Sep 20

9:43pm

SAN

as low as

^$295

Frequently Asked Questions

What are the cheapest and fastest flights from San Jose to San Diego?

The cheapest flight is with Alaska Airlines at $324, taking 14 hours 22 minutes. The fastest flight is with American Airlines at $825, taking 7 hours 4 minutes.

What are all possible destination arrival airports?

The possible destination arrival airports for your flight include San Diego International Airport, Dallas Fort Worth International Airport, Los Angeles International Airport, Harry Reid International Airport, Miami International Airport, Orlando International Airport, General Edward Lawrence Logan International Airport, and New York John F. Kennedy Airport.

What is the time difference between destination and arrival?

The flight duration from Juan Santamaria International Airport to San Diego International Airport varies from 7 hours 4 minutes to 24 hours 3 minutes, depending on the flight choice. Please check specific times for exact differences.

Is there a direct flight from origin to destination?

There is no direct flight from San Jose to San Diego. The cheapest flight is $324 with Alaska Airlines, requiring 2 stops and taking 14 hours 22 minutes.

Are there convenient layover flights from San Jose to San Diego?

Yes, convenient layover flights are available. The 1-stop flight with American Airlines costs $343, and the 2-stop flights are with Alaska Airlines at $324, American Airlines at $343, and JetBlue at $587.

What are the most convenient layover airports for my flight?

The most convenient layover airports for your flight from San Jose to San Diego are Los Angeles International Airport, Dallas Fort Worth International Airport, Miami International Airport, Harry Reid International Airport, and Orlando International Airport.

Flights to San Diego

Top Destinations

Origins

Return flights

Cabin Class

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Call now!

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Flight Deals from San Jose to San Diego from $161

Stops

Airlines

Cabin Class

Departure Airports

Arrival Airports

Layover Airports

Best Price. GUARANTEED.

Top Deals on flights from San Jose to San Diego

Frequently Asked Questions

Flights to San Diego